Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853777.1_cds_XP_016512360.1_25011
CDS Infomation

[gene=LOC107829408] [db_xref=GeneID:107829408] [protein=probable mediator of RNA polymerase II transcription subunit 26b] [protein_id=XP_016512360.1] [location=join(53367..53828,54407..54472,54585..54667,55244..55296,55430..55557,55652..55679,55791..56125,56208..56298,56389..56528)] [gbkey=CDS]
Sequence

ATGGCCAAGAGTTTTGGGACTCTTGATAAATGGAGGGATTATTTTAGGACAGCAAATTCA
GATATATTTGATATAATTGAGCATGCAGTTATGGTGGCAGCTACAGATTGTCCAAAAGAG
TTCAAATTGAGAAGAGATAAAATTGCTGAAATGCTTTTTACATGTAAAGTCACAAGGTGT
TTTGGTTGTGATAAGGTTGAATTAGCAGTGCCACTTGCTAACGATGATGAGGGAAAGAAT
AAGAATAAGAGTGATTTTGGTGGAGGATTTGAGGCTGCTGGTGGTAGTAAAGAGAGCAAA
GCTAATAGTAGTATAGATCATCATATTGAATTGAATGTGAATCAAGTTAGCAATTATAGT
TATGGAGAAGCTGAGGCATTGACTGAGGTGATTGAAGAAGAGACTCAGACTCTTGGAGAG
GTTCTTAGGATCAAAGATATTATTGATAACAATCAACATGAGTCCGCAGAGGTATATGAG
TGCTTAAGAAGGCTTCAACTAATGGCTTTGTCTGTGGAGACTCTGAAGGCTACAGAGATT
GGAAAGTCAGTTAATGCTCTCAGAAAGCACAGCTCAAAGGATATTCGGCATCTATCCCGG
ACATTGATTGAGGATTGGAAAGTTTTGGTAGATGAATGGGTGAATGCTACTGCAGCCTTT
ACAGGTACCGAAAGCACTCCAGAGTCTATGAAAGTATCTGTAGTTGATCAAGAGGAGGAA
GGACTTCCTTCCCCGCCGTTGGATGACTTAGCTTTCTTTGCTGCTCAGACCACTTCAATG
GAGTTGTCACAATTCTTTGACGGCATGGATGATGATGGAAATCCTCGAAACAGTGGGGAA
TTCAACGAGAACCGTGGAAATGGCAGAAAGTTGTCACTGGATAACCAGAATAATCCAGTT
CGGAAGAAGCAGTCGGCTGATTTCTTCGATGCTGCTCCCAAGGAGAGCAAGGGTGAACAA
CAAAAGAAACAAGAAGCTGTAATCAAGAAACAAACACCAGTTATGAGACCAAATAAGCCA
TCCGGAGGTGACTCTGGGCCTGGAAGACCGATAAAACCAGTTTCGGAACAGAAACTCAAG
ATGAGCGAGATGAACTTCCAGCAGAAATCCGATAAAGGCACAGTTCAAAAGAGGCCTGTG
CCTTCTCAACTAAATAAACTTAGACACTCAGATGAGGATGCAGTTCAAGTCAAACTTGAG
GCAACAAAGAGAAAGCTTCAAGAACGGTACCAAGAAGCTGAAAATGCCAAGAGGCAGCGG
ACAATACAGGTTATGGAGTTGCACGATATCCCCAAGCAGGGTATCTCCAACCAAGGTCTT
GGCCTTAAAAATCCTCATATGAGACCGGGCAACAATAATAGGCATTGGGCAAATGGACGT
CGCTGA

Peptide Sequence

PEP ID

XP_016512360.1
PEP Infomation

PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Nicotiana tabacum]
Sequence

MAKSFGTLDKWRDYFRTANSDIFDIIEHAVMVAATDCPKEFKLRRDKIAEMLFTCKVTRC
FGCDKVELAVPLANDDEGKNKNKSDFGGGFEAAGGSKESKANSSIDHHIELNVNQVSNYS
YGEAEALTEVIEEETQTLGEVLRIKDIIDNNQHESAEVYECLRRLQLMALSVETLKATEI
GKSVNALRKHSSKDIRHLSRTLIEDWKVLVDEWVNATAAFTGTESTPESMKVSVVDQEEE
GLPSPPLDDLAFFAAQTTSMELSQFFDGMDDDGNPRNSGEFNENRGNGRKLSLDNQNNPV
RKKQSADFFDAAPKESKGEQQKKQEAVIKKQTPVMRPNKPSGGDSGPGRPIKPVSEQKLK
MSEMNFQQKSDKGTVQKRPVPSQLNKLRHSDEDAVQVKLEATKRKLQERYQEAENAKRQR
TIQVMELHDIPKQGISNQGLGLKNPHMRPGNNNRHWANGRR

Transcript Sequence

Gene sequence data has not been registered.